Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BBA_00605 | BBA_01492 | J4WMQ9 | J4UU89 | Uncharacterized protein. | GRF zinc finger domain-containing protein. | 0.654 |
BBA_00605 | BBA_01647 | J4WMQ9 | J4UUK3 | Uncharacterized protein. | Histone deacetylase domain-containing protein. | 0.658 |
BBA_00605 | BBA_02300 | J4WMQ9 | J4WHD7 | Uncharacterized protein. | Tryptophan synthase. | 0.792 |
BBA_00605 | BBA_02676 | J4WMQ9 | J4KQ67 | Uncharacterized protein. | Nucleosome remodeling factor CAF-I subunit. | 0.659 |
BBA_00605 | BBA_05164 | J4WMQ9 | J5JJZ2 | Uncharacterized protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.643 |
BBA_00605 | BBA_06137 | J4WMQ9 | J4UKU7 | Uncharacterized protein. | Chromodomain-helicase-DNA-binding protein. | 0.692 |
BBA_00605 | BBA_09264 | J4WMQ9 | J5J5A7 | Uncharacterized protein. | AB hydrolase-1 domain-containing protein. | 0.654 |
BBA_00605 | BBA_09945 | J4WMQ9 | J5J2Q8 | Uncharacterized protein. | Histone H2B; Belongs to the histone H2B family. | 0.671 |
BBA_00605 | BBA_10034 | J4WMQ9 | J4VQS0 | Uncharacterized protein. | Histone H3; Belongs to the histone H3 family. | 0.654 |
BBA_00605 | BBA_10331 | J4WMQ9 | J4UEM9 | Uncharacterized protein. | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.658 |
BBA_01492 | BBA_00605 | J4UU89 | J4WMQ9 | GRF zinc finger domain-containing protein. | Uncharacterized protein. | 0.654 |
BBA_01492 | BBA_01647 | J4UU89 | J4UUK3 | GRF zinc finger domain-containing protein. | Histone deacetylase domain-containing protein. | 0.795 |
BBA_01492 | BBA_02676 | J4UU89 | J4KQ67 | GRF zinc finger domain-containing protein. | Nucleosome remodeling factor CAF-I subunit. | 0.943 |
BBA_01492 | BBA_05164 | J4UU89 | J5JJZ2 | GRF zinc finger domain-containing protein. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.944 |
BBA_01492 | BBA_06137 | J4UU89 | J4UKU7 | GRF zinc finger domain-containing protein. | Chromodomain-helicase-DNA-binding protein. | 0.566 |
BBA_01492 | BBA_09945 | J4UU89 | J5J2Q8 | GRF zinc finger domain-containing protein. | Histone H2B; Belongs to the histone H2B family. | 0.962 |
BBA_01492 | BBA_10331 | J4UU89 | J4UEM9 | GRF zinc finger domain-containing protein. | Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. | 0.795 |
BBA_01647 | BBA_00605 | J4UUK3 | J4WMQ9 | Histone deacetylase domain-containing protein. | Uncharacterized protein. | 0.658 |
BBA_01647 | BBA_01492 | J4UUK3 | J4UU89 | Histone deacetylase domain-containing protein. | GRF zinc finger domain-containing protein. | 0.795 |
BBA_01647 | BBA_02676 | J4UUK3 | J4KQ67 | Histone deacetylase domain-containing protein. | Nucleosome remodeling factor CAF-I subunit. | 0.970 |
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