Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BBA_00316 | BBA_02300 | J5K970 | J4WHD7 | Histidine biosynthesis trifunctional protein. | Tryptophan synthase. | 0.987 |
BBA_00316 | BBA_03398 | J5K970 | J5JRN0 | Histidine biosynthesis trifunctional protein. | Pyridoxal-dependent decarboxylase domain protein. | 0.923 |
BBA_00316 | BBA_06844 | J5K970 | J4W0U8 | Histidine biosynthesis trifunctional protein. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.415 |
BBA_00483 | BBA_03398 | J5K3E6 | J5JRN0 | Cysteine dioxygenase. | Pyridoxal-dependent decarboxylase domain protein. | 0.630 |
BBA_01002 | BBA_02300 | J5K0V1 | J4WHD7 | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). | Tryptophan synthase. | 0.582 |
BBA_01002 | BBA_03398 | J5K0V1 | J5JRN0 | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). | Pyridoxal-dependent decarboxylase domain protein. | 0.704 |
BBA_01002 | BBA_05267 | J5K0V1 | J5JTE1 | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). | Cytochrome b5-like Heme/Steroid binding domain-containing protein. | 0.459 |
BBA_01002 | BBA_06844 | J5K0V1 | J4W0U8 | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.832 |
BBA_01980 | BBA_03398 | J4WG93 | J5JRN0 | Fungal specific transcription factor. | Pyridoxal-dependent decarboxylase domain protein. | 0.981 |
BBA_01980 | BBA_04742 | J4WG93 | J4KNT2 | Fungal specific transcription factor. | Synaptobrevin-like protein. | 0.989 |
BBA_02300 | BBA_00316 | J4WHD7 | J5K970 | Tryptophan synthase. | Histidine biosynthesis trifunctional protein. | 0.987 |
BBA_02300 | BBA_01002 | J4WHD7 | J5K0V1 | Tryptophan synthase. | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). | 0.582 |
BBA_02300 | BBA_03398 | J4WHD7 | J5JRN0 | Tryptophan synthase. | Pyridoxal-dependent decarboxylase domain protein. | 0.841 |
BBA_02300 | BBA_06844 | J4WHD7 | J4W0U8 | Tryptophan synthase. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.785 |
BBA_02300 | BBA_08856 | J4WHD7 | J4UGT7 | Tryptophan synthase. | Fusarium oxysporum panthotenate synthetase. | 0.562 |
BBA_03398 | BBA_00316 | J5JRN0 | J5K970 | Pyridoxal-dependent decarboxylase domain protein. | Histidine biosynthesis trifunctional protein. | 0.923 |
BBA_03398 | BBA_00483 | J5JRN0 | J5K3E6 | Pyridoxal-dependent decarboxylase domain protein. | Cysteine dioxygenase. | 0.630 |
BBA_03398 | BBA_01002 | J5JRN0 | J5K0V1 | Pyridoxal-dependent decarboxylase domain protein. | Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). | 0.704 |
BBA_03398 | BBA_01980 | J5JRN0 | J4WG93 | Pyridoxal-dependent decarboxylase domain protein. | Fungal specific transcription factor. | 0.981 |
BBA_03398 | BBA_02300 | J5JRN0 | J4WHD7 | Pyridoxal-dependent decarboxylase domain protein. | Tryptophan synthase. | 0.841 |
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