Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BBA_01228 | BBA_02477 | J4KR54 | J4WER3 | RNA polymerase Rpb6. | Histone H2A; Belongs to the histone H2A family. | 0.792 |
BBA_01228 | BBA_04274 | J4KR54 | J5JXH9 | RNA polymerase Rpb6. | SNF2 family domain-containing protein. | 0.710 |
BBA_01228 | BBA_09945 | J4KR54 | J5J2Q8 | RNA polymerase Rpb6. | Histone H2B; Belongs to the histone H2B family. | 0.925 |
BBA_01228 | BBA_10034 | J4KR54 | J4VQS0 | RNA polymerase Rpb6. | Histone H3; Belongs to the histone H3 family. | 0.958 |
BBA_01228 | BBA_10340 | J4KR54 | J5J194 | RNA polymerase Rpb6. | DNA repair protein, SNF2 family. | 0.710 |
BBA_02058 | BBA_02088 | J5JWN8 | J5JWS5 | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | Crossover junction endonuclease MUS81. | 0.974 |
BBA_02058 | BBA_04274 | J5JWN8 | J5JXH9 | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | SNF2 family domain-containing protein. | 0.904 |
BBA_02058 | BBA_06645 | J5JWN8 | J5JEI9 | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | 3'-5' exonuclease. | 0.998 |
BBA_02058 | BBA_10034 | J5JWN8 | J4VQS0 | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | Histone H3; Belongs to the histone H3 family. | 0.639 |
BBA_02058 | BBA_10340 | J5JWN8 | J5J194 | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | DNA repair protein, SNF2 family. | 0.973 |
BBA_02088 | BBA_02058 | J5JWS5 | J5JWN8 | Crossover junction endonuclease MUS81. | DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. | 0.974 |
BBA_02088 | BBA_04274 | J5JWS5 | J5JXH9 | Crossover junction endonuclease MUS81. | SNF2 family domain-containing protein. | 0.714 |
BBA_02088 | BBA_06645 | J5JWS5 | J5JEI9 | Crossover junction endonuclease MUS81. | 3'-5' exonuclease. | 0.997 |
BBA_02088 | BBA_10340 | J5JWS5 | J5J194 | Crossover junction endonuclease MUS81. | DNA repair protein, SNF2 family. | 0.892 |
BBA_02477 | BBA_01228 | J4WER3 | J4KR54 | Histone H2A; Belongs to the histone H2A family. | RNA polymerase Rpb6. | 0.792 |
BBA_02477 | BBA_04274 | J4WER3 | J5JXH9 | Histone H2A; Belongs to the histone H2A family. | SNF2 family domain-containing protein. | 0.732 |
BBA_02477 | BBA_05444 | J4WER3 | J4W5D5 | Histone H2A; Belongs to the histone H2A family. | RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. | 0.983 |
BBA_02477 | BBA_07960 | J4WER3 | J4VXR2 | Histone H2A; Belongs to the histone H2A family. | Methyl-CpG-binding domain-containing protein 4. | 0.526 |
BBA_02477 | BBA_09945 | J4WER3 | J5J2Q8 | Histone H2A; Belongs to the histone H2A family. | Histone H2B; Belongs to the histone H2B family. | 0.990 |
BBA_02477 | BBA_10034 | J4WER3 | J4VQS0 | Histone H2A; Belongs to the histone H2A family. | Histone H3; Belongs to the histone H3 family. | 0.992 |
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