MAC_00468 protein (Metarhizium acridum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MAC_00468

Serine/threonine-protein kinase bur-1. (543 aa)

Predicted Functional Partners:

MAC_03773

0.996

MAC_07408

0.970

MAC_02389

0.965

MAC_00236

0.882

MAC_00639

0.823

MAC_00451

0.809

MAC_07697

0.797

MAC_09356

0.762

MAC_02431

0.756

MAC_00048

0.722

Your Current Organism:

Metarhizium acridum

NCBI taxonomy Id: 655827
Other names: M. acridum CQMa 102, Metarhizium acridum CQMa 102, Metarhizium anisopliae var. acridum CQMa 102

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MAC_00048	MAC_00236	E9DRX5	E9DR67	RNA polymerase II subunit 3.	C-type cyclin.	0.656
MAC_00048	MAC_00451	E9DRX5	E9DS53	RNA polymerase II subunit 3.	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.998
MAC_00048	MAC_00468	E9DRX5	E9DS70	RNA polymerase II subunit 3.	Serine/threonine-protein kinase bur-1.	0.722
MAC_00048	MAC_02389	E9DRX5	E9DXP1	RNA polymerase II subunit 3.	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.998
MAC_00048	MAC_02431	E9DRX5	E9DXT3	RNA polymerase II subunit 3.	Serine/threonine-protein kinase; Belongs to the protein kinase superfamily.	0.961
MAC_00048	MAC_03773	E9DRX5	E9E1M5	RNA polymerase II subunit 3.	Cyclin; Belongs to the cyclin family.	0.832
MAC_00048	MAC_07408	E9DRX5	E9EC10	RNA polymerase II subunit 3.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
MAC_00048	MAC_07697	E9DRX5	E9ECU9	RNA polymerase II subunit 3.	RNA polymerase II subunit A phosphatase.	0.982
MAC_00048	MAC_09356	E9DRX5	E9EHK8	RNA polymerase II subunit 3.	Cyclin_C_2 domain-containing protein.	0.948
MAC_00236	MAC_00048	E9DR67	E9DRX5	C-type cyclin.	RNA polymerase II subunit 3.	0.656
MAC_00236	MAC_00451	E9DR67	E9DS53	C-type cyclin.	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.766
MAC_00236	MAC_00468	E9DR67	E9DS70	C-type cyclin.	Serine/threonine-protein kinase bur-1.	0.882
MAC_00236	MAC_00639	E9DR67	E9DSP1	C-type cyclin.	CTD kinase subunit gamma.	0.810
MAC_00236	MAC_02389	E9DR67	E9DXP1	C-type cyclin.	Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	0.579
MAC_00236	MAC_02431	E9DR67	E9DXT3	C-type cyclin.	Serine/threonine-protein kinase; Belongs to the protein kinase superfamily.	0.766
MAC_00236	MAC_07697	E9DR67	E9ECU9	C-type cyclin.	RNA polymerase II subunit A phosphatase.	0.709
MAC_00236	MAC_09356	E9DR67	E9EHK8	C-type cyclin.	Cyclin_C_2 domain-containing protein.	0.780
MAC_00451	MAC_00048	E9DS53	E9DRX5	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	RNA polymerase II subunit 3.	0.998
MAC_00451	MAC_00236	E9DS53	E9DR67	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	C-type cyclin.	0.766
MAC_00451	MAC_00468	E9DS53	E9DS70	Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.	Serine/threonine-protein kinase bur-1.	0.809