STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAC_03075Uncharacterized protein. (542 aa)    
Predicted Functional Partners:
MAC_04577
PHD finger domain-containing protein.
    
 0.972
MAC_05932
DNA-directed RNA polymerase II subunit RPB11.
   
 0.966
MAC_01379
DNA-directed RNA polymerases II 24 kDa polypeptide.
   
 0.963
MAC_06247
DNA-directed RNA polymerases I/II/III subunit 10.
   
 0.959
MAC_07185
DNA-directed RNA polymerases I.
   
 0.957
MAC_00048
RNA polymerase II subunit 3.
   
 0.956
MAC_00451
Transcription elongation factor SPT4; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
   
 0.956
MAC_03334
DNA directed RNA polymerase II 15 kDa subunit, putative.
   
 0.956
MAC_05288
RNA polymerase Rpb4 family protein.
   
 0.955
MAC_02463
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.954
Your Current Organism:
Metarhizium acridum
NCBI taxonomy Id: 655827
Other names: M. acridum CQMa 102, Metarhizium acridum CQMa 102, Metarhizium anisopliae var. acridum CQMa 102
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