STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAC_07876Small nuclear ribonucleoprotein Sm D3. (113 aa)    
Predicted Functional Partners:
MAC_02612
Small nuclear ribonucleoprotein SmF.
   
 0.999
MAC_05164
Small nuclear ribonucleoprotein SmG.
   
 0.999
MAC_05247
Eukaryotic Sm and Sm-like (LSm) protein.
   
 0.999
MAC_05418
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.999
MAC_05968
Small nuclear ribonucleoprotein Sm D2.
   
 0.999
MAC_08139
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
   
 0.999
MAC_02582
Pre-mRNA-splicing factor prp1, putative.
   
 0.998
MAC_06748
U2 small nuclear ribonucleoprotein A.
   
 0.998
MAC_04098
Pre-mRNA processing splicing factor 8.
   
 0.997
MAC_06607
Putative ribosomal elongation factor EF-2.
   
 0.997
Your Current Organism:
Metarhizium acridum
NCBI taxonomy Id: 655827
Other names: M. acridum CQMa 102, Metarhizium acridum CQMa 102, Metarhizium anisopliae var. acridum CQMa 102
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.