STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAC_08271Protein transport protein SEC13; Belongs to the WD repeat SEC13 family. (304 aa)    
Predicted Functional Partners:
MAC_00097
Protein transport protein SEC24.
   
 0.999
MAC_01141
Nucleoporin nsp1.
    
 0.999
MAC_01337
Putative nuclear pore protein; Belongs to the WD repeat SEC13 family.
    
0.999
MAC_03170
Zinc_ribbon_16 domain-containing protein.
    
 0.999
MAC_03426
Nucleoporin SONB, putative.
    
 0.999
MAC_03871
Nuclear pore complex subunit Nup133.
    
 0.999
MAC_04616
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.999
MAC_04836
WD repeat protein.
    
 0.999
MAC_06452
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.999
MAC_06523
Protein transport protein (SEC31).
    
 0.999
Your Current Organism:
Metarhizium acridum
NCBI taxonomy Id: 655827
Other names: M. acridum CQMa 102, Metarhizium acridum CQMa 102, Metarhizium anisopliae var. acridum CQMa 102
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