STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAC_08648Pre-mRNA-splicing factor RSE1. (1221 aa)    
Predicted Functional Partners:
MAC_00967
Splicing factor subunit; Belongs to the SF3B5 family.
   
 0.995
MAC_03007
Pre-mRNA branch site protein p14.
    
 0.995
MAC_05918
Splicing factor 3b subunit 4.
   
 0.995
MAC_06040
CID domain-containing protein.
   
 0.995
MAC_08046
Splicing factor 3b.
   
 0.995
MAC_08147
U2 snRNP component prp10.
   
 0.995
MAC_03726
Pre-mRNA splicing factor ini1.
   
 0.993
MAC_08611
Pre-mRNA splicing factor.
   
 0.939
MAC_04055
Splicing factor 3A subunit 3.
   
 0.933
MAC_02612
Small nuclear ribonucleoprotein SmF.
   
 0.931
Your Current Organism:
Metarhizium acridum
NCBI taxonomy Id: 655827
Other names: M. acridum CQMa 102, Metarhizium acridum CQMa 102, Metarhizium anisopliae var. acridum CQMa 102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.