STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_6960ABC multidrug transporter. (1316 aa)    
Predicted Functional Partners:
CMQ_2530
Ubiquitin carboxyl-terminal hydrolase.
    
  0.643
CMQ_294
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
  0.617
CMQ_7533
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
  0.602
CMQ_486
Cell division control protein cdc48; Belongs to the AAA ATPase family.
    
 0.593
CMQ_2757
Aaa family ATPase.
    
 0.593
CMQ_2728
Ubiquitin conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.586
CMQ_7414
Ap-2 adaptor complex subunit; Belongs to the adaptor complexes medium subunit family.
    
  0.583
CMQ_2056
Enth domain containing protein.
    
 0.559
CMQ_2652
Ubiquitin c-terminal hydrolase.
    
  0.550
CMQ_4038
ABC transporter.
    
 0.543
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.