STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_6717Tetraspanin tsp3. (295 aa)    
Predicted Functional Partners:
CMQ_2346
Sulfite oxidase.
     
 0.779
CMQ_3490
Nitrate reductase.
     
 0.662
CMQ_3603
Polyketide synthase.
   
 0.628
CMQ_1363
Fe-containing alcohol dehydrogenase.
     
 0.461
CMQ_7564
ATP synthase delta mitochondrial.
    
 0.448
CMQ_4404
4-hydroxyphenylpyruvate dioxygenase.
     
 0.441
CMQ_3926
Polyketide synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
    
  0.440
CMQ_5203
Thioesterase family protein.
    
  0.440
CMQ_5095
Polyketide synthase.
    
  0.440
CMQ_5323
Polyketide synthase.
    
  0.440
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.