STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_6699RNA-dependent RNA polymerase. (1259 aa)    
Predicted Functional Partners:
CMQ_4469
RNA helicase rnase; Belongs to the helicase family. Dicer subfamily.
    
 
 0.580
CMQ_1404
Regulator of nonsense.
     
 0.555
CMQ_2947
Rnase3 domain containing protein.
    
 
 0.519
CMQ_7332
Topoisomerase family protein.
    
 
 0.513
CMQ_4826
Nucleolar rnase.
    
 
 0.509
CMQ_1052
Aaa family ATPase.
    
 
 0.471
CMQ_6353
Nf-x1 finger and helicase domain containing protein.
    
 
 0.471
CMQ_3257
60S ribosomal protein l3.
    
 
 0.440
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.