STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_6869Extracellular cell wall glucanase. (331 aa)    
Predicted Functional Partners:
CMQ_2399
Uncharacterized protein.
    
 0.887
CMQ_7291
Histone h3.
    
 0.817
CMQ_7496
Uncharacterized protein.
    
 0.817
CMQ_1756
Histone H3; Belongs to the histone H3 family.
    
 0.817
CMQ_4874
Cue domain containing protein.
    
 0.817
CMQ_6257
Cross-pathway control protein 1.
     
 0.781
CMQ_994
60S ribosomal protein.
     
 0.776
CMQ_3785
Uncharacterized protein.
    
 0.743
CMQ_8051
tRNA-splicing endonuclease subunit.
    
 0.743
CMQ_509
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
    
   0.729
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.