STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_3777Uncharacterized protein. (438 aa)    
Predicted Functional Partners:
CMQ_5335
60S ribosomal protein.
   
   0.782
CMQ_2737
60S ribosomal protein l2.
   
 
 0.720
CMQ_7182
60S ribosomal protein l16; Belongs to the universal ribosomal protein uL13 family.
   
   0.716
CMQ_4650
Cyclin dependent kinase inhibitor.
    
 0.710
CMQ_5997
Mitochondrial import receptor subunit.
    
 0.696
CMQ_865
Uncharacterized protein.
    
  0.689
CMQ_794
Proteasome regulatory particle subunit.
    
  0.689
CMQ_7931
Glycerophosphodiester phosphodiesterase gde1.
    
  0.689
CMQ_4235
60S ribosomal protein l40.
    
  0.677
CMQ_4115
RNA polymerase 1 specific transcription initiation factor.
    
  0.677
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.