STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_4177C6 zinc finger domain containing protein. (994 aa)    
Predicted Functional Partners:
CMQ_6185
Ankyrin repeat-containing protein.
   
 0.643
CMQ_3655
DNA-binding protein cre-1.
    
 0.624
CMQ_6988
Tol-like protein.
   
  0.608
CMQ_1645
Glucose galactose transporter.
 
  
 0.578
CMQ_1117
Repressor protein.
     
 0.551
CMQ_378
Endo-1,4-beta-xylanase; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
    
 
 0.533
CMQ_5830
Zinc finger protein csr1p.
    
 0.528
CMQ_4971
Glucanase; Belongs to the glycosyl hydrolase 7 (cellulase C) family.
    
 
 0.501
CMQ_3607
D-xylulose kinase.
      
 0.493
CMQ_1567
Nucleoporin nup49.
    
  0.490
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.