STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_3900C6 zinc finger domain containing protein. (945 aa)    
Predicted Functional Partners:
CMQ_2387
Acetylglutamate kinase.
     
 0.799
CMQ_2284
RNA cyclase; In the N-terminal section; belongs to the acetylglutamate kinase family.
     
 0.799
CMQ_3660
Ketose-bisphosphate aldolase class-ii family protein.
     
 0.791
CMQ_7581
Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.
     
 0.791
CMQ_7722
Phosphogluconate dehydrogenase.
     
 0.791
CMQ_4906
Aminotransferase class 5.
  
 0.764
CMQ_5573
Fumarate lyase.
   
 0.703
CMQ_3651
Aspartokinase.
    
 0.682
CMQ_6551
Siderophore biosynthesis protein.
    
 0.671
CMQ_2305
Aspartate-semialdehyde dehydrogenase.
    
 0.654
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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