STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_4006Nuclear pore complex protein; Belongs to the WD repeat SEC13 family. (304 aa)    
Predicted Functional Partners:
CMQ_6994
Protein transport protein.
    
 0.999
CMQ_3933
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.999
CMQ_713
Nucleoporin nup189.
    
 0.999
CMQ_1567
Nucleoporin nup49.
    
 0.999
CMQ_2917
Nuclear pore protein; Belongs to the WD repeat SEC13 family.
    
0.999
CMQ_5600
Nuclear pore complex subunit.
    
 0.999
CMQ_5639
Ran-binding protein.
    
 0.999
CMQ_2734
WD repeat protein.
    
 0.998
CMQ_6047
WD repeat protein.
    
 0.998
CMQ_7151
Zinc_ribbon_16 domain-containing protein.
    
 0.998
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.