STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_3326MARVEL domain-containing protein. (91 aa)    
Predicted Functional Partners:
CMQ_7633
Swi-snf complex subunit.
    
 0.803
CMQ_4043
Chromatin remodeling and histone acetyltransferase complexes subunit; Belongs to the actin family.
    
 0.801
CMQ_522
Rsc complex subunit.
    
 0.801
CMQ_127
Swib mdm2 domain containing protein.
    
 0.799
CMQ_4160
Rsc complex subunit.
    
 0.651
CMQ_1385
Bromodomain protein.
    
 0.651
CMQ_7956
U1 small nuclear ribonucleoprotein.
    
  0.649
CMQ_6976
Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.
    
 0.622
CMQ_8096
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
    
 0.609
CMQ_3517
Uncharacterized protein.
    
 0.605
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.