STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_3801Centrin-binding protein. (1276 aa)    
Predicted Functional Partners:
CMQ_1698
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.795
CMQ_3748
RNA polymerase 2 elongator complex subunit.
     
 0.743
CMQ_2793
Glycyl-tRNA synthetase.
   
  
 0.711
CMQ_76
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
  
 0.707
CMQ_4091
Lysine--tRNA ligase.
  
 
 0.675
CMQ_3870
Tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.658
CMQ_7614
Tryptophanyl-tRNA synthetase.
  
 
 0.646
CMQ_4604
Phenylalanyl-tRNA synthetase alpha subunit.
   
 
 0.632
CMQ_4496
Lysyl-tRNA synthetase.
  
 
 0.625
CMQ_1090
Saga-like transcriptional regulatory complex subunit.
    
 
 0.620
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.