STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_4249Isocitrate dehydrogenase. (363 aa)    
Predicted Functional Partners:
CMQ_324
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
  
0.958
CMQ_6646
Homoaconitase, mitochondrial; Catalyzes the reversible hydration of cis-homoaconitate to (2R,3S)-homoisocitrate, a step in the alpha-aminoadipate pathway for lysine biosynthesis.
 0.950
CMQ_1214
3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
 
 0.839
CMQ_6096
Saccharopine dehydrogenase.
   
  
 0.807
CMQ_2578
Aromatic aminotransferase.
   
 0.805
CMQ_1576
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.795
CMQ_6933
Mitochondrial acetolactate synthase small.
  
 0.777
CMQ_161
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.762
CMQ_2428
Alpha-ketoglutarate dehydrogenase complex subunit.
   
 0.742
CMQ_5251
Uncharacterized protein.
  
 0.719
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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