STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_3968Ornithine aminotransferase. (422 aa)    
Predicted Functional Partners:
CMQ_2387
Acetylglutamate kinase.
  
 
 0.993
CMQ_2284
RNA cyclase; In the N-terminal section; belongs to the acetylglutamate kinase family.
  
 
 0.993
CMQ_5412
Arginase; Belongs to the arginase family.
 
 0.982
CMQ_5652
Argininosuccinate lyase.
  
 
 0.915
CMQ_31
Arginine biosynthesis bifunctional protein ArgJ, mitochondrial; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate; Belongs to the ArgJ family.
  
 
 0.899
CMQ_1702
Biotin synthase.
 
 
 
 0.895
CMQ_6958
Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
 
 
 0.880
CMQ_2420
Argininosuccinate synthase.
  
 0.876
CMQ_676
Gamma-glutamyl phosphate reductase.
   
 0.859
CMQ_7704
Aspartate/glutamate/uridylate kinase.
   
 0.843
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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