STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_533560S ribosomal protein. (160 aa)    
Predicted Functional Partners:
CMQ_6964
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
 
 0.999
CMQ_6984
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 
 0.999
CMQ_6890
40S ribosomal protein s5; Belongs to the universal ribosomal protein uS7 family.
   
 
 0.999
CMQ_6557
40S ribosomal protein s10b.
   
 
 0.999
CMQ_3500
40S ribosomal protein s17.
   
 
 0.999
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
 
 0.999
CMQ_3824
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
   
 0.999
CMQ_5325
40S ribosomal protein s9; Belongs to the universal ribosomal protein uS4 family.
 
 
 0.999
CMQ_1305
60S ribosomal protein l8.
   
 0.999
CMQ_491
60S ribosomal protein l5.
   
 0.999
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.