STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_5318SMP-LTD domain-containing protein. (601 aa)    
Predicted Functional Partners:
CMQ_5111
DNA polymerase zeta catalytic.
 
      0.670
CMQ_3508
Hexaprenyl pyrophosphate synthetase.
 
      0.638
CMQ_6104
Integral er membrane protein.
    
 0.622
CMQ_3674
Bap31 domain protein.
   
  0.606
CMQ_5197
Cytoskeleton assembly control protein.
 
 
    0.571
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.