STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_1438Haloacid dehalogenase-like hydrolase. (300 aa)    
Predicted Functional Partners:
CMQ_491
60S ribosomal protein l5.
 
      0.900
CMQ_6551
Siderophore biosynthesis protein.
    
  0.703
CMQ_6588
Sterol carrier protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.645
CMQ_276
Translation initiation factor; Belongs to the eIF-2B alpha/beta/delta subunits family.
  
 
  0.607
CMQ_6260
Glutaryl-mitochondrial.
  
 0.601
CMQ_1575
Peroxisomal dehydratase.
  
 0.591
CMQ_2904
Peroxisomal multifunctional beta-oxidation protein.
  
 0.591
CMQ_175
Ubx domain containing protein.
    
   0.582
CMQ_573
Chromodomain containing protein.
   
 0.554
CMQ_8299
Acyl-dehydrogenase domain containing protein.
  
 0.554
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.