STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_1639Uncharacterized protein. (365 aa)    
Predicted Functional Partners:
CMQ_3490
Nitrate reductase.
    
  0.800
CMQ_6185
Ankyrin repeat-containing protein.
    
 0.623
CMQ_7390
40S ribosomal protein s20.
    
  0.606
CMQ_8006
37S ribosomal protein.
    
  0.602
CMQ_5449
40S ribosomal protein.
    
  0.600
CMQ_5067
37S ribosomal protein s16.
    
  0.600
CMQ_6084
37S ribosomal protein s9; Belongs to the universal ribosomal protein uS9 family.
    
  0.600
CMQ_6613
50S ribosomal protein mrp49.
    
  0.599
CMQ_3506
Ribosomal protein.
    
  0.599
CMQ_2074
Mitochondrial 40S ribosomal protein mrp2.
    
  0.599
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.