STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_1374Aaa family ATPase. (1018 aa)    
Predicted Functional Partners:
CMQ_2111
Cdc48-dependent protein degradation adaptor protein.
   
 0.863
CMQ_1862
Endoplasmic reticulum and nuclear membrane proteinc.
   
 0.858
CMQ_175
Ubx domain containing protein.
    
 0.852
CMQ_6833
Misfolded glycoproteins degradation protein.
    
 0.846
CMQ_4227
Otu-like cysteine peptidase.
   
 0.842
CMQ_6365
Ubx domain protein.
    
 0.836
CMQ_5126
Ubx domain containing protein.
    
 0.828
CMQ_5954
An1-type zinc finger protein.
   
 0.828
CMQ_3184
Proteasome subunit beta.
   
 0.827
CMQ_7535
Ubiquitin fusion degradation protein.
    
 0.823
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.