STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_849Uncharacterized protein. (283 aa)    
Predicted Functional Partners:
CMQ_5709
Upf0047 domain containing protein.
 
      0.899
CMQ_3508
Hexaprenyl pyrophosphate synthetase.
    
 0.689
CMQ_1246
Alkyl transferase; Belongs to the UPP synthase family.
    
  0.684
CMQ_2676
Di-cis-decaprenylcistransferase.
    
  0.684
CMQ_2253
Squalene synthetase.
     
 0.673
CMQ_877
Geranylgeranyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
    
 0.667
CMQ_829
Uncharacterized protein.
   
 
 0.658
CMQ_2417
Uncharacterized protein.
   
 
 0.658
CMQ_4272
Aristolochene synthase.
    
 0.643
CMQ_97
Farnesyl-pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
    
 0.515
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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