STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_993Ankyrin repeat protein. (1025 aa)    
Predicted Functional Partners:
CMQ_586
Sumo conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.956
CMQ_4697
Mob1 family protein.
    
 
 0.945
CMQ_837
Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.
    
   0.937
CMQ_5653
Pre-mRNA splicing factor.
    
   0.937
CMQ_5204
C6 zinc finger domain containing protein.
    
 0.903
CMQ_1254
C6 zinc finger domain containing protein.
    
 0.903
CMQ_5011
Uncharacterized protein.
    
 
 0.844
CMQ_4611
Sulfur metabolism regulator; Belongs to the SKP1 family.
    
 
 0.844
CMQ_4005
Chromosome segregation protein.
    
 
 0.788
CMQ_3001
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
    
 0.739
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.