STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_1283Protein phosphatase. (560 aa)    
Predicted Functional Partners:
CMQ_3416
Gcn5-related n-acetyltransferase.
    
   0.896
CMQ_5388
2-oxoisovalerate dehydrogenase.
    
 0.859
CMQ_5888
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
    
 0.844
CMQ_3962
2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3).
   
 0.841
CMQ_6185
Ankyrin repeat-containing protein.
   
 0.788
CMQ_6941
Traf-like signal protein.
   
 0.754
CMQ_7287
Alternative oxidase.
   
 0.738
CMQ_121
Camk family protein kinase.
   
 0.738
CMQ_1152
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 0.723
CMQ_2787
Methionyl-tRNA formyltransferase family.
  
   0.718
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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