STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_1033Ccch zinc finger DNA-binding protein. (367 aa)    
Predicted Functional Partners:
CMQ_7294
GTP-binding protein.
   
 
 0.994
CMQ_2554
GTP-binding protein.
   
 
 0.956
CMQ_1218
Elongation factor 3.
   
 
 0.936
CMQ_5015
mRNA-nucleus export ATPase.
   
 
 0.827
CMQ_7352
60S ribosomal protein l23.
   
   0.784
CMQ_7760
40S ribosomal protein s15; Belongs to the universal ribosomal protein uS19 family.
   
   0.784
CMQ_5324
Ribosome associated chaperone.
   
   0.783
CMQ_491
60S ribosomal protein l5.
   
   0.776
CMQ_5388
2-oxoisovalerate dehydrogenase.
 
      0.760
CMQ_4969
Ribosomal protein s5; Belongs to the universal ribosomal protein uS5 family.
   
   0.757
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.