STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_374Fibronectin type 3 domain containing protein. (1260 aa)    
Predicted Functional Partners:
CMQ_65
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.799
CMQ_2305
Aspartate-semialdehyde dehydrogenase.
   
 
 0.681
CMQ_6192
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
    
 0.613
CMQ_7439
S-adenosylmethionine decarboxylase proenzyme.
     
 0.583
CMQ_6551
Siderophore biosynthesis protein.
   
 
  0.577
CMQ_1702
Biotin synthase.
   
 
  0.572
CMQ_3603
Polyketide synthase.
  
 
 0.471
CMQ_605
Extracellular developmental signal biosynthesis protein; Belongs to the glutamine synthetase family.
     
 0.465
CMQ_2412
Glutamine synthetase.
     
 0.465
CMQ_4976
Glutamine synthetase; Belongs to the glutamine synthetase family.
     
 0.465
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.