STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_1289Duf1772 domain containing protein. (578 aa)    
Predicted Functional Partners:
CMQ_4412
Embryonic ectoderm development protein.
    
 0.737
CMQ_4180
Histone-lysine n-methyltransferase.
    
 0.701
CMQ_3727
Set domain containing protein.
    
 0.700
CMQ_8005
WD repeat protein.
    
 0.697
CMQ_3033
Chromatin assembly factor 1 subunit.
    
 0.695
CMQ_1740
Uncharacterized protein.
    
 0.680
CMQ_6647
Jumonji family transcription factor.
   
 0.677
CMQ_6566
Histone H2A; Belongs to the histone H2A family.
    
 0.659
CMQ_7291
Histone h3.
   
 0.640
CMQ_1756
Histone H3; Belongs to the histone H3 family.
   
 0.640
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.