STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_869Uncharacterized protein. (539 aa)    
Predicted Functional Partners:
CMQ_3785
Uncharacterized protein.
    
 0.828
CMQ_8051
tRNA-splicing endonuclease subunit.
    
 0.828
CMQ_2399
Uncharacterized protein.
    
 0.747
CMQ_6869
Extracellular cell wall glucanase.
    
 0.708
CMQ_6647
Jumonji family transcription factor.
    
 0.668
CMQ_7020
Casein kinase.
    
 0.636
CMQ_2131
Casein kinase; Belongs to the protein kinase superfamily.
    
 0.636
CMQ_6257
Cross-pathway control protein 1.
    
 0.627
CMQ_4599
WD repeat protein.
    
  0.589
CMQ_5598
Uncharacterized protein.
    
 0.584
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.