STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_588Class 3 chitinase 2. (923 aa)    
Predicted Functional Partners:
CMQ_2382
Aminotransferase class 3; Belongs to the glycosyl hydrolase 18 family.
  
  
 
0.803
CMQ_3210
Beta-hexosaminidase.
     
 0.794
CMQ_1333
Glycoside hydrolase.
    
  0.776
CMQ_6374
Glycoside hydrolase.
     
 0.776
CMQ_3575
Class 5 chitinase; Belongs to the glycosyl hydrolase 18 family.
     
 0.598
CMQ_5391
Class 5 chitinase 1; Belongs to the glycosyl hydrolase 18 family.
     
 0.598
CMQ_8025
Class 5 chitinase 1.
     
 0.505
CMQ_4824
Class 5 chitinase chi100.
     
 0.505
CMQ_3232
Cell wall glucanase.
   
  
 0.495
CMQ_5441
C2h2 transcription factor.
   
 
 0.480
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.