STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_445Homogentisate-dioxygenase. (505 aa)    
Predicted Functional Partners:
CMQ_4404
4-hydroxyphenylpyruvate dioxygenase.
  
 0.951
CMQ_6158
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
    
 0.690
CMQ_2883
Uncharacterized protein.
  
 
 0.674
CMQ_1993
Uncharacterized protein.
  
 
 0.674
CMQ_272
Fumarylacetoacetase.
 
 
 0.624
CMQ_3298
Fumarylacetoacetase.
 
 
 0.621
CMQ_3249
Pterin-4-alpha-carbinolamine dehydratase.
  
  
 0.575
CMQ_4198
Fumarylacetoacetate hydrolase family protein.
  
 
 0.567
CMQ_3329
Fumarylacetoacetate hydrolase family protein.
  
 
 0.567
CMQ_3087
Fumarylacetoacetate hydrolase family protein.
  
 
 0.567
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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