STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_1141tRNA nucleotidyltransferase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (539 aa)    
Predicted Functional Partners:
CMQ_833
Uncharacterized protein.
 
      0.900
CMQ_4521
3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the 2nd section; belongs to the EPSP synthase family. In the 4th section; belongs to the type-I 3-dehydroquinase family. In the N-terminal section; belongs to the dehydroquinate synthase family.
      0.747
CMQ_3459
Smp-30/gluconolaconase/lre-like region containing protein.
    
 0.637
CMQ_1297
Evolved d-pantonohydrolase.
    
 0.637
CMQ_7395
25S rRNA adenine-N(1) methyltransferase; S-adenosyl-L-methionine-dependent methyltransferase that specifically methylates the N(1) position of an adenine present in helix 65 in 25S rRNA; Belongs to the BMT2 family.
    
 0.637
CMQ_242
Uncharacterized protein.
    
 0.637
CMQ_8304
Exosome complex exonuclease exoribonuclease; Belongs to the RNR ribonuclease family.
  
 0.610
CMQ_7873
Cell wall biogenesis protein phosphatase.
  
 0.610
CMQ_2735
Mitochondrial exoribonuclease.
  
 0.602
CMQ_4155
Peptidyl-prolyl cis-trans isomerase b.
   
   0.593
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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