STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_1030Zinc finger, mynd-type domain containing protein. (222 aa)    
Predicted Functional Partners:
CMQ_5954
An1-type zinc finger protein.
    
 0.760
CMQ_2436
Ubiquitin-conjugating enzyme.
    
 0.725
CMQ_6084
37S ribosomal protein s9; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.701
CMQ_4235
60S ribosomal protein l40.
    
  0.696
CMQ_4115
RNA polymerase 1 specific transcription initiation factor.
    
  0.696
CMQ_532
Mitochondrial ribosomal protein; Belongs to the universal ribosomal protein uL11 family.
    
 
 0.695
CMQ_4265
50S ribosomal protein l3.
   
 
 0.694
CMQ_3662
BZIP domain-containing protein.
    
 0.692
CMQ_5418
Ubiquitin.
    
 0.692
CMQ_5866
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.690
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.