STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_5391Class 5 chitinase 1; Belongs to the glycosyl hydrolase 18 family. (398 aa)    
Predicted Functional Partners:
CMQ_3210
Beta-hexosaminidase.
     
 0.781
CMQ_7027
Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.
   
 0.655
CMQ_4915
Cytochrome c subunit.
   
 0.650
CMQ_6730
Oxidoreductase.
   
 0.647
CMQ_5282
Cytochrome c oxidase subunit; Belongs to the cytochrome c oxidase subunit 6A family.
   
 0.635
CMQ_2686
Cytochrome c oxidase subunit.
   
 0.628
CMQ_3575
Class 5 chitinase; Belongs to the glycosyl hydrolase 18 family.
  
  
 
0.612
CMQ_588
Class 3 chitinase 2.
     
 0.598
CMQ_4425
Cytochrome c oxidase subunit 5.
   
 0.598
CMQ_4217
Uncharacterized protein.
   
  0.577
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.