STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_3175Homeobox and c2h2 transcription factor. (1237 aa)    
Predicted Functional Partners:
CMQ_5649
Mads box transcription factor mcm1.
   
 
 0.779
CMQ_788
Histone deacetylase rpd3.
    
 0.636
CMQ_8252
Histone deacetylase.
    
 0.636
CMQ_3213
Homeobox transcription factor.
  
 
 
 0.605
CMQ_2878
Homeobox transcription factor.
     
0.597
CMQ_6074
Uncharacterized protein.
  
 
 
 0.558
CMQ_104
Cellular morphogenesis protein.
    
 0.549
CMQ_5533
E3 ubiquitin-protein ligase.
    
 0.549
CMQ_4606
Uncharacterized protein.
    
 0.549
CMQ_4072
Gas2 domain containing protein.
  
 
   0.515
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.