STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_2870Scytalone dehydratase. (158 aa)    
Predicted Functional Partners:
CMQ_2025
Antiviral protein.
    
 0.831
CMQ_1766
Dead deah box RNA helicase.
    
 0.827
CMQ_7230
RNA polymerase 2 transcription elongation factor.
    
 0.738
CMQ_4445
Pol 2 transcription elongation factor subunit.
    
 0.736
CMQ_3514
Uv-damaged DNA-binding protein.
    
  0.706
CMQ_5528
Uncharacterized protein.
    
 0.695
CMQ_4635
RNA polymerase ii-associated, paf1.
    
 0.695
CMQ_1447
Uncharacterized protein.
    
 0.691
CMQ_4339
Cytochrome c; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 0.691
CMQ_4266
SMN domain-containing protein.
    
 0.682
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.