STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_3144Uncharacterized protein. (359 aa)    
Predicted Functional Partners:
CMQ_1
Centromere microtubule-binding protein cbf5.
   
   0.726
CMQ_973
60S ribosome biogenesis protein.
   
   0.699
CMQ_7165
Nucleolus protein required for cell.
   
  
 0.682
CMQ_56
rRNA processing protein.
   
    0.653
CMQ_7058
Protein MAK16; Belongs to the MAK16 family.
   
  
 0.634
CMQ_7264
Duf1665 domain containing protein.
   
   0.619
CMQ_3043
Small nucleolar ribonucleoprotein complex subunit putatrive.
   
    0.617
CMQ_4615
Ribosomal biogenesis protein gar2.
   
    0.605
CMQ_434
Pumilio domain containing protein.
   
  
 0.597
CMQ_7045
rRNA-processing protein efg1.
   
    0.596
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.