STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_2770Cytidine and deoxycytidylate deaminase. (173 aa)    
Predicted Functional Partners:
CMQ_2886
Drap deaminase.
 
  
 0.919
CMQ_8182
Mitochondrial GTPase.
   
 
 0.850
CMQ_5861
RNA methyltransferase.
  
 
 0.845
CMQ_1073
Zinc finger protein.
    
 0.832
CMQ_558
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
    
 0.832
CMQ_4334
Riboflavin biosynthesis protein.
    
 0.832
CMQ_915
Carbohydrate/purine kinase.
    
 0.831
CMQ_661
Carbohydrate/purine kinase.
    
 0.831
CMQ_2792
Adenosine kinase.
    
 0.831
CMQ_4463
Pseudouridine synthase.
  
 
 0.828
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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