STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_3199Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (127 aa)    
Predicted Functional Partners:
CMQ_3838
Nucleolar protein nop5.
   
 0.999
CMQ_5436
Pre-rRNA processing nucleolar protein.
   
 0.999
CMQ_3109
Small nucleolar ribonucleoprotein complex.
   
 0.999
CMQ_6204
Fibrillarin.
   
 0.999
CMQ_3160
Small nucleolar ribonucleoprotein complex subunit.
   
 0.998
CMQ_1501
Pre-mRNA splicing factor.
    
 0.996
CMQ_4782
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
  
 0.996
CMQ_6595
DNA-binding protein.
    
 0.995
CMQ_1867
Small nucleolar ribonucleoprotein complex.
   
 0.995
CMQ_1966
U4/U6 small nuclear ribonucleoprotein.
    
 0.995
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.