STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_2107Aar2 domain containing protein. (531 aa)    
Predicted Functional Partners:
CMQ_307
Pre-mRNA splicing factor.
    
 
 0.991
CMQ_1948
U5 snrnp component.
    
 
 0.953
CMQ_2012
Regulatory factor.
    
 
 0.934
CMQ_2050
Pre-mRNA splicing factor.
    
 
 0.882
CMQ_4441
Gyf domain containing protein.
   
 
 0.795
CMQ_8125
Dead deah box DNA helicase; Belongs to the DEAD box helicase family.
    
 
 0.769
CMQ_3520
Translation elongation factor.
    
 
 0.679
MEF1
Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome.
    
 
 0.679
CMQ_2911
Elongation factor 2.
    
 
 0.679
CMQ_2458
Ribosome biogenesis protein.
    
 
 0.679
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.