STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_2425C2h2 finger and ankyrin domain protein. (690 aa)    
Predicted Functional Partners:
CMQ_486
Cell division control protein cdc48; Belongs to the AAA ATPase family.
    
 
 0.892
CMQ_2757
Aaa family ATPase.
   
 
 0.810
CMQ_2250
3-methylcrotonyl-carboxylase subunit alpha.
 
 
    0.803
TIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family.
    
   0.737
CMQ_5064
Duf814 domain containing protein.
   
 
 0.661
CMQ_1374
Aaa family ATPase.
    
 
 0.653
CMQ_1018
Aaa family ATPase.
    
 
 0.653
CMQ_1552
Stage 5 sporulation protein.
    
 
 0.653
CMQ_8088
Aaa family ATPase.
    
 
 0.653
CMQ_7305
Aaa family ATPase.
    
 
 0.653
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.