STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_2161Protein rho3. (208 aa)    
Predicted Functional Partners:
CMQ_4590
Rho GTPase activator.
    
 0.999
CMQ_7793
RNA recognition motif-containing protein.
   
 0.995
CMQ_3866
Uncharacterized protein.
    
 0.992
CMQ_3696
Rho-GDP dissociation inhibitor.
   
 0.901
CMQ_5819
Rho GTPase activator.
    
 0.899
CMQ_6185
Ankyrin repeat-containing protein.
   
 0.879
CMQ_3752
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.866
CMQ_5284
Uncharacterized protein.
   
 0.850
CMQ_4902
Rho guanyl nucleotide exchange factor.
    
 0.850
CMQ_2144
Rho GTPase activator.
    
 0.840
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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