STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_2218Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting. (915 aa)    
Predicted Functional Partners:
CMQ_912
Vacuolar protein sorting-associated protein.
   
 0.999
CMQ_4728
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
   
 0.999
CMQ_5245
Sorting nexin-3.
   
 0.985
CMQ_6010
Vacuolar protein sorting-associated protein.
   
 
 0.979
CMQ_3850
Vacuolar protein sorting-associated protein 17; Plays a role in vesicular protein sorting. Belongs to the VPS17 family.
   
 
 0.946
CMQ_7753
Tbc domain protein.
   
 
 0.820
CMQ_473
Sortilin; Functions as a sorting receptor in the Golgi compartment required for the intracellular sorting and delivery of soluble vacuolar proteins, like carboxypeptidase Y (CPY) and proteinase A.
    
 
 0.798
CMQ_7967
Vacuolar targeting protein.
   
 
 0.771
CMQ_3787
Rab small monomeric GTPase.
    
 
 0.764
CMQ_1761
Sorting nexin mvp1.
   
 
 0.724
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.