STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_2285Transcription factor tfiiib complex subunit. (829 aa)    
Predicted Functional Partners:
CMQ_5663
Transcription factor tfiiib.
    
 0.999
CMQ_7632
Sam domain containing protein.
    
 0.991
CMQ_968
DNA-directed RNA polymerase 3 subunit.
    
 0.983
CMQ_1652
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.979
CMQ_3985
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.977
CMQ_1115
RNA polymerase 1 and 3 transcription factor complex component.
   
 0.975
CMQ_6369
RNA polymerase 1 and 3 transcription factor complex component.
   
 0.975
CMQ_627
Calcitonin gene-related peptide-receptor component protein.
    
 0.968
CMQ_1170
DNA-directed RNA polymerase 1 and 3 subunit.
    
 0.948
CMQ_3546
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.947
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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