STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_8085Pt repeat family protein. (1832 aa)    
Predicted Functional Partners:
CMQ_5144
Er-golgi snare complex subunit.
   
 0.906
CMQ_5855
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.881
CMQ_3593
Golgi reassembly stacking protein.
    
 0.805
CMQ_3442
GTP-binding protein ypt1.
    
 0.709
CMQ_5853
Anucleate primary sterigmata protein B.
    
 0.709
CMQ_5858
Endosomal cargo receptor.
    
  0.672
CMQ_5789
Golgi transport protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.645
CMQ_6298
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
     
 0.640
CMQ_2495
Dynactin arp1 p62 subunit.
    
  0.617
CMQ_6633
Snare domain containing protein; Belongs to the syntaxin family.
    
 0.609
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.