Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CMQ_1567 | CMQ_2917 | F0XCB8 | F0XI19 | Nucleoporin nup49. | Nuclear pore protein; Belongs to the WD repeat SEC13 family. | 0.999 |
CMQ_1567 | CMQ_3933 | F0XCB8 | F0X9B9 | Nucleoporin nup49. | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | 0.999 |
CMQ_1567 | CMQ_4006 | F0XCB8 | F0X9L4 | Nucleoporin nup49. | Nuclear pore complex protein; Belongs to the WD repeat SEC13 family. | 0.999 |
CMQ_1567 | CMQ_5600 | F0XCB8 | F0XSJ6 | Nucleoporin nup49. | Nuclear pore complex subunit. | 0.999 |
CMQ_1567 | CMQ_5639 | F0XCB8 | F0XSN4 | Nucleoporin nup49. | Ran-binding protein. | 0.999 |
CMQ_1567 | CMQ_8288 | F0XCB8 | F0XKX0 | Nucleoporin nup49. | Transcription factor. | 0.845 |
CMQ_2736 | CMQ_8288 | F0XGW7 | F0XKX0 | Serine/threonine-protein kinase. | Transcription factor. | 0.636 |
CMQ_2917 | CMQ_1567 | F0XI19 | F0XCB8 | Nuclear pore protein; Belongs to the WD repeat SEC13 family. | Nucleoporin nup49. | 0.999 |
CMQ_2917 | CMQ_3933 | F0XI19 | F0X9B9 | Nuclear pore protein; Belongs to the WD repeat SEC13 family. | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | 0.999 |
CMQ_2917 | CMQ_4006 | F0XI19 | F0X9L4 | Nuclear pore protein; Belongs to the WD repeat SEC13 family. | Nuclear pore complex protein; Belongs to the WD repeat SEC13 family. | 0.999 |
CMQ_2917 | CMQ_5600 | F0XI19 | F0XSJ6 | Nuclear pore protein; Belongs to the WD repeat SEC13 family. | Nuclear pore complex subunit. | 0.999 |
CMQ_2917 | CMQ_5639 | F0XI19 | F0XSN4 | Nuclear pore protein; Belongs to the WD repeat SEC13 family. | Ran-binding protein. | 0.999 |
CMQ_2917 | CMQ_8288 | F0XI19 | F0XKX0 | Nuclear pore protein; Belongs to the WD repeat SEC13 family. | Transcription factor. | 0.619 |
CMQ_3933 | CMQ_1567 | F0X9B9 | F0XCB8 | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | Nucleoporin nup49. | 0.999 |
CMQ_3933 | CMQ_2917 | F0X9B9 | F0XI19 | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | Nuclear pore protein; Belongs to the WD repeat SEC13 family. | 0.999 |
CMQ_3933 | CMQ_4006 | F0X9B9 | F0X9L4 | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | Nuclear pore complex protein; Belongs to the WD repeat SEC13 family. | 0.999 |
CMQ_3933 | CMQ_5600 | F0X9B9 | F0XSJ6 | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | Nuclear pore complex subunit. | 0.999 |
CMQ_3933 | CMQ_5639 | F0X9B9 | F0XSN4 | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | Ran-binding protein. | 0.999 |
CMQ_3933 | CMQ_8288 | F0X9B9 | F0XKX0 | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | Transcription factor. | 0.642 |
CMQ_4006 | CMQ_1567 | F0X9L4 | F0XCB8 | Nuclear pore complex protein; Belongs to the WD repeat SEC13 family. | Nucleoporin nup49. | 0.999 |
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