STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMQ_5973WD domain containing protein. (583 aa)    
Predicted Functional Partners:
CMQ_1210
Ran-binding protein.
   
 
 0.991
CMQ_1396
Ctlh domain containing protein.
    
 
 0.969
CMQ_4506
Regulator of gluconeogenesis.
   
 
 0.951
CMQ_6137
Endosomal spry domain protein.
   
 
 0.829
CMQ_6108
Uncharacterized protein.
   
 
 0.829
CMQ_4355
Uncharacterized protein.
   
 
 0.829
CMQ_7304
Vesicle-mediated transport protein.
    
 
 0.797
CMQ_5545
Negative regulation of gluconeogenesis protein.
    
 
 0.794
CMQ_3033
Chromatin assembly factor 1 subunit.
  
 
 0.757
CMQ_4319
Deacetylase complex subunit.
    
 0.731
Your Current Organism:
Grosmannia clavigera
NCBI taxonomy Id: 655863
Other names: G. clavigera kw1407, Grosmannia clavigera kw1407
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.